PROGNOS Summary for Tesson_IgM_Ranking-TALENv2.0

The rn4 genome was searched for the TALEN pair targeting:
5'- TTCCTGCCCAGCTCCAT NN..NN ACCAGAACAACACTGAA -3'

Using these RVDs:
Left: 01NG02HD03HD04NG05NN06HD07HD08HD09NI10NN11HD12NG13HD14HD15NI16NG
Right: 01NG02HD03NI04NN05NG06NN07NG08NG09NN10NG11NG12HD13NG14NN15NN16NG

Up to 5 mismatches were allowed in each nuclease half-site.

Allowed spacing distances were: 12 13 14 15 16 17 18 19 20 21 22 23 24

Only heterodimers of the nuclease pair were included in the output

2541 total sites were located
Mismatch TypesGenomic Regions
  0 and 0: 1
  3 and 3: 1
  2 and 5: 3
  3 and 4: 12
  3 and 5: 61
  4 and 4: 23
  4 and 5: 538
  5 and 5: 1902
  Exons: 47
  Promoters: 13
  Introns: 646
  Intergenic: 1835


The top 100 sites are ranked below according to parameters optimized for TALEN off-target prediction. For the full output, click here.

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Primer pairs were designed using the 400 bp of sequence on either side of the cleavage site to melt close to 60 °C

For easy visualization of cleavage on gels:
The smallest fragment will be longer than 130 bp, which is also the minimum separation distance between uncleaved and cleaved products.
The two cleavage products will be separated by a minimum size of 0 bp
To optimize assay conditions, the amplicons have a minimum length of 260 bp, a maximum length of 450 bp, and an optimal length of 270 bp.

Rank: 1 Homology Score: 72 TALEN Score: 100 Genomic Region: Intergenic Closest Gene: Adam6 Caution! This site scores very closely to the intended nuclease target. The potential for cleavage at this site is of great concern. Match Type: R17L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATGAC TTCAGTGTTGTTCTGGT AGTTCCAGGAGAAGGAA ATGGAGCTGGGCAGGAA GTCCC-3' 3'-TACTG AAGTCACAACAAGACCA TCAAGGTCCTCTTCCTT TACCTCGACCCGTCCTT CAGGG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 006-138443970 Forward Primer: 5'-GGAATCGGCACATGCAGATCTTTG-3' Tm: 59.038 Reverse Primer: 5'-TCTGGTCCTCAGAGAGTCAGTC-3' Tm: 59.258 Expected PCR Product Length: 325 Expected CelI Cleavage Product Sizes: 194, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr6:138444137-138444187
Rank: 2 Homology Score: 17 TALEN Score: 62.39 Genomic Region: Intergenic Closest Gene: RGD1559903 Match Type: R16L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTCCA TGCAGTGTTGTTCTGTT GTCAGTAATGGATGCC AGAGAGTTGGGATGGAA TGAGA-3' 3'-AAGGT ACGTCACAACAAGACAA CAGTCATTACCTACGG TCTCTCAACCCTACCTT ACTCT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 020-016460972 Forward Primer: 5'-GTCAAGGACGAAGTCATCTGGAG-3' Tm: 59.148 Reverse Primer: 5'-GACAAGCTGACTGCTGCTAGAG-3' Tm: 59.258 Expected PCR Product Length: 340 Expected CelI Cleavage Product Sizes: 144, 196 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr20:16461089-16461138
Rank: 3 Homology Score: 18 TALEN Score: 61.93 Genomic Region: Intron Closest Gene: Pdcd11 Match Type: R16L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTGGA TGCAGACTTGTTCTGGT CCTGTTAGCAGACCTC AGGGATCTGGGGAGGAA TTAGC-3' 3'-AACCT ACGTCTGAACAAGACCA GGACAATCGTCTGGAG TCCCTAGACCCCTCCTT AATCG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 001-252428669 Forward Primer: 5'-GTTGTGTTTCAGGACAGCACTACC-3' Tm: 59.038 Reverse Primer: 5'-GTTGGAGAGGCCACATTCTTAACC-3' Tm: 59.038 Expected PCR Product Length: 308 Expected CelI Cleavage Product Sizes: 162, 146 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:252428804-252428853
Rank: 4 Homology Score: 17 TALEN Score: 61.83 Genomic Region: Intergenic Closest Gene: Lrfn2 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TCCCC TTCCTGCCCAGCTCCCA TCCCCACCCCCTTCTGAGAACTAA ACAGGAAGCACACGGAA CCTGC-3' 3'-AGGGG AAGGACGGGTCGAGGGT AGGGGTGGGGGAAGACTCTTGATT TGTCCTTCGTGTGCCTT GGACG-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 009-007190270 Forward Primer: 5'-AGTTGGGCTGGTAGAAATTGCTGG-3' Tm: 59.038 Reverse Primer: 5'-CTGAGTGAAACAAACGGCTCCGA-3' Tm: 59.148 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 133, 137 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr9:7190372-7190429
Rank: 5 Homology Score: 13 TALEN Score: 60.64 Genomic Region: Intergenic Closest Gene: Tssc1 Match Type: L17R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGGGG CTCCTGCCCAGATCCTT CTCTGCCAGGCTGCCCC TCCAGCACAATATTGAA TCTCA-3' 3'-CCCCC GAGGACGGGTCTAGGAA GAGACGGTCCGACGGGG AGGTCGTGTTATAACTT AGAGT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 006-046986724 Forward Primer: 5'-CTTCTGGCTTAGTTTCCGTCTGTC-3' Tm: 59.038 Reverse Primer: 5'-CTCAGCTTGCCCAAGGGTTATAG-3' Tm: 59.148 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 130, 140 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr6:46986827-46986877
Rank: 6 Homology Score: 13 TALEN Score: 59.43 Genomic Region: Intron Closest Gene: Acvrl1 Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AAGGC TTCATTGAGGTTCTGGT CTTCATGATCACAGAAGCGGC CTGGAGTTGGGAAGGAG GAAGA-3' 3'-TTCCG AAGTAACTCCAAGACCA GAAGTACTAGTGTCTTCGCCG GACCTCAACCCTTCCTC CTTCT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 007-139879252 Forward Primer: 5'-AAAGGCTCATTAGACACGCTCAGG-3' Tm: 59.038 Reverse Primer: 5'-CACGTCTCTGCAGACCCCAT-3' Tm: 59.508 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 134, 136 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr7:139879357-139879411
Rank: 7 Homology Score: 8 TALEN Score: 59.39 Genomic Region: Intergenic Closest Gene: Prdm2 Match Type: R19L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TACCT TTCAGGGTTGTTCTAAA AACTAACTGGAGAACACAA ATGGCGCCTGGCATGAA GTAAC-3' 3'-ATGGA AAGTCCCAACAAGATTT TTGATTGACCTCTTGTGTT TACCGCGGACCGTACTT CATTG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 005-161756246 Forward Primer: 5'-CTCTAGGGGCTAAGTATCTCAGCT-3' Tm: 59.038 Reverse Primer: 5'-GGTGGCAAAATCTAAACCCTGTGG-3' Tm: 59.038 Expected PCR Product Length: 280 Expected CelI Cleavage Product Sizes: 130, 150 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:161756348-161756400
Rank: 8 Homology Score: 10 TALEN Score: 59.07 Genomic Region: Intergenic Closest Gene: Mir206 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTTA TTAGTGCCCAAATCTAT AGTAGTAATGGTCTAATTTGAGC TCCAGAATAACTCTGAA TCAAA-3' 3'-AAAAT AATCACGGGTTTAGATA TCATCATTACCAGATTAAACTCG AGGTCTTATTGAGACTT AGTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 009-019047855 Forward Primer: 5'-GTGGCTTTGGTCCTCATCTGTC-3' Tm: 59.258 Reverse Primer: 5'-CCTCTTTCGGAGATAGGCATGTTC-3' Tm: 59.038 Expected PCR Product Length: 302 Expected CelI Cleavage Product Sizes: 161, 141 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr9:19047986-19048042
Rank: 9 Homology Score: 13 TALEN Score: 58.86 Genomic Region: Intron Closest Gene: Sars Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GTAAG TACCTCCCCAGCTCAAT TCCACTCACACAACCACAGATA ACCAGGCCAAAACAGAA GTACC-3' 3'-CATTC ATGGAGGGGTCGAGTTA AGGTGAGTGTGTTGGTGTCTAT TGGTCCGGTTTTGTCTT CATGG-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 002-204001007 Forward Primer: 5'-AATTTATGGGCTCTGTGCCGTGC-3' Tm: 59.148 Reverse Primer: 5'-CCCAGTGCTAAGTTGAGTGTGGC-3' Tm: 61.088 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 135, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr2:204001112-204001167
Rank: 10 Homology Score: 10 TALEN Score: 58.68 Genomic Region: Intergenic Closest Gene: Pard3 Match Type: R12L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTTGC TTTTTTATTGTTCTGGA AGTTAAGTTTGA ATGGGGCTTGGTAGGAA ATGAT-3' 3'-AAACG AAAAAATAACAAGACCT TCAATTCAAACT TACCCCGAACCATCCTT TACTA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 019-057896612 Forward Primer: 5'-CCCAGTGCTGGGGTTACAAACA-3' Tm: 59.258 Reverse Primer: 5'-TCTTAGCCAGGAATGAGGCTGC-3' Tm: 59.258 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 138, 132 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr19:57896725-57896770
Rank: 11 Homology Score: 13 TALEN Score: 58.5 Genomic Region: Intergenic Closest Gene: Wdfy3 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTCT TTCAGTCCCAGCTCCAT TTTTGTCCCTGCATTGCCTTTAG ACAGGAACAACTCTGAG TTGCA-3' 3'-AAAGA AAGTCAGGGTCGAGGTA AAAACAGGGACGTAACGGAAATC TGTCCTTGTTGAGACTC AACGT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 014-008802083 Forward Primer: 5'-TGCCAGGCTCCTGTCTGCAT-3' Tm: 59.508 Reverse Primer: 5'-GCTACCAGGACTCAATGGGG-3' Tm: 59.508 Expected PCR Product Length: 299 Expected CelI Cleavage Product Sizes: 139, 160 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr14:8802192-8802248
Rank: 12 Homology Score: 17 TALEN Score: 58.39 Genomic Region: Exon Closest Gene: Mapk6 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATACA TTCAGTGTTGGACTGGT CCTGAGCAGCATCCT AAGGCGCTGGGAAGCAC TCGTT-3' 3'-TATGT AAGTCACAACCTGACCA GGACTCGTCGTAGGA TTCCGCGACCCTTCGTG AGCAA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 008-080224511 Forward Primer: 5'-GGGTAGCGACTCTGCAGACA-3' Tm: 59.508 Reverse Primer: 5'-GTGACTGTGGTGAGCTGGAG-3' Tm: 59.508 Expected PCR Product Length: 333 Expected CelI Cleavage Product Sizes: 196, 137 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:80224681-80224729
Rank: 13 Homology Score: 10 TALEN Score: 58.3 Genomic Region: Intergenic Closest Gene: MGC125002 Match Type: R23L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTTGA TCCAGAATTGTTCTGGT CTAAAAGAAATGTGGTGATAAAA ATGGAGCAGAGATTGAA GGAAA-3' 3'-AAACT AGGTCTTAACAAGACCA GATTTTCTTTACACCACTATTTT TACCTCGTCTCTAACTT CCTTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 005-113632907 Forward Primer: 5'-GGAGGAATCTCTAGAAAGTCCCAG-3' Tm: 59.038 Reverse Primer: 5'-GGCTCCTATCTGCAGGTCCA-3' Tm: 59.508 Expected PCR Product Length: 339 Expected CelI Cleavage Product Sizes: 208, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:113633085-113633141
Rank: 14 Homology Score: 5 TALEN Score: 58.03 Genomic Region: Intron Closest Gene: Top1 Match Type: L21R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TGGAC TTCCTGCACCACTCAAT GGCTGTGATTATCAGCACAAG ACATGAACAATATTGAG CCTGT-3' 3'-ACCTG AAGGACGTGGTGAGTTA CCGACACTAATAGTCGTGTTC TGTACTTGTTATAACTC GGACA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-151465311 Forward Primer: 5'-CACACACACACACACACACACAC-3' Tm: 59.148 Reverse Primer: 5'-CACCAGTGACAACAGCACTTGAG-3' Tm: 59.148 Expected PCR Product Length: 330 Expected CelI Cleavage Product Sizes: 186, 144 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:151465468-151465522
Rank: 15 Homology Score: 13 TALEN Score: 58.03 Genomic Region: Intergenic Closest Gene: Atpbd4 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CATAA TTCAATGTTGTTTGGGC TTTTTTTTTTTTTTT TTGGAGCTGGGGACGAA CCCAG-3' 3'-GTATT AAGTTACAACAAACCCG AAAAAAAAAAAAAAA AACCTCGACCCCTGCTT GGGTC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 003-100952790 Forward Primer: 5'-GCCATGAAGAAGACATGCAGGAG-3' Tm: 59.148 Reverse Primer: 5'-GGATCACTTGAAATGTGGAGCTTCCTAC-3' Tm: 60.298 Expected PCR Product Length: 405 Expected CelI Cleavage Product Sizes: 218, 187 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:100952982-100953030
Rank: 16 Homology Score: 10 TALEN Score: 57.96 Genomic Region: Intergenic Closest Gene: Map2 Match Type: R13L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATTTA TTCATTGTTGTTCTTGG TGGCTGCGTTATC AGTGTTCTGGTCAGGAA GTTGT-3' 3'-TAAAT AAGTAACAACAAGAACC ACCGACGCAATAG TCACAAGACCAGTCCTT CAACA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 009-065106893 Forward Primer: 5'-CCTCTGTTGGATGTGGAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-CGCACACCTATGGACATCTGAG-3' Tm: 59.258 Expected PCR Product Length: 396 Expected CelI Cleavage Product Sizes: 137, 259 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr9:65107005-65107051
Rank: 17 Homology Score: 13 TALEN Score: 57.83 Genomic Region: Intergenic Closest Gene: Ifnar1 Match Type: L15R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CCTTG TTCCTTCCCAGCTGCCT AGGAATGTGGGACCA ACCTGAGCAACACAGCA AGAGC-3' 3'-GGAAC AAGGAAGGGTCGACGGA TCCTTACACCCTGGT TGGACTCGTTGTGTCGT TCTCG-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 011-031478392 Forward Primer: 5'-GATCTGATCCCCTTTTCTGGTGTG-3' Tm: 59.038 Reverse Primer: 5'-CTTCTTTAGCACGTCGCCCC-3' Tm: 59.508 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 134, 136 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr11:31478500-31478548
Rank: 18 Homology Score: 10 TALEN Score: 57.71 Genomic Region: Intergenic Closest Gene: Plcl2 Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATGTT TTCAGTGTTGCTCCTGT TGGGTAAAGGAGGAATGTTCC CTGGATCGGGGCTGGTA TAGTG-3' 3'-TACAA AAGTCACAACGAGGACA ACCCATTTCCTCCTTACAAGG GACCTAGCCCCGACCAT ATCAC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 009-004673112 Forward Primer: 5'-AATCCACCGAGCCTAGTAACTGC-3' Tm: 59.148 Reverse Primer: 5'-TACACTGCGCTCACACAGCAAG-3' Tm: 59.258 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 135, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr9:4673218-4673272
Rank: 19 Homology Score: 10 TALEN Score: 57.66 Genomic Region: Intron Closest Gene: Rnf4 Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GTAGA TCCCTCCCCAGCTCCCT TGTCAGGACCTAGCCAGGT ACATGATCAACATTCAA GAAAA-3' 3'-CATCT AGGGAGGGGTCGAGGGA ACAGTCCTGGATCGGTCCA TGTACTAGTTGTAAGTT CTTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 014-082098705 Forward Primer: 5'-AGCCAAGGAAGAAACCTGTGCAGC-3' Tm: 60.908 Reverse Primer: 5'-CTGTGGATGGCTAGAGTGTACTCA-3' Tm: 59.038 Expected PCR Product Length: 300 Expected CelI Cleavage Product Sizes: 130, 170 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr14:82098807-82098859
Rank: 20 Homology Score: 10 TALEN Score: 57.66 Genomic Region: Intron Closest Gene: Ralgapa1 Match Type: L13R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TCTCC TTCCTTTCCAGCTCCCT TCTTTCTTTCATT ACTAGATATGCACTGAA AGCTG-3' 3'-AGAGG AAGGAAAGGTCGAGGGA AGAAAGAAAGTAA TGATCTATACGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 006-075907048 Forward Primer: 5'-GGTGTCCTCATTCACCTCTGACAA-3' Tm: 59.038 Reverse Primer: 5'-GTGTTTGGAACATCCTCTGCGAC-3' Tm: 59.148 Expected PCR Product Length: 363 Expected CelI Cleavage Product Sizes: 189, 174 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr6:75907212-75907258
Rank: 21 Homology Score: 10 TALEN Score: 57.63 Genomic Region: Intergenic Closest Gene: Mir532 Match Type: L21R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTTT TTCCTACCCACCCCCAT GCCTCCCCAGCCTTGGATGAA ACAGGAACAAAAGTCAA AATTT-3' 3'-AAAAA AAGGATGGGTGGGGGTA CGGAGGGGTCGGAACCTACTT TGTCCTTGTTTTCAGTT TTAAA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-027254372 Forward Primer: 5'-CCATTATCGCTAGCCTAGCTTACG-3' Tm: 59.038 Reverse Primer: 5'-GACTGGGAATAAGTGGTGTGGTAC-3' Tm: 59.038 Expected PCR Product Length: 301 Expected CelI Cleavage Product Sizes: 167, 134 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:27254510-27254564
Rank: 22 Homology Score: 10 TALEN Score: 57.55 Genomic Region: Intron Closest Gene: Tsc2 Match Type: L18R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTAGC TACCTGTCCAGCACCAT GTCTGCCTGGTGCCTCCC ACCATGACAATAATGGA CTAAA-3' 3'-AATCG ATGGACAGGTCGTGGTA CAGACGGACCACGGAGGG TGGTACTGTTATTACCT GATTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 010-013862379 Forward Primer: 5'-CATAGGTGGGGCCTTATCAGAG-3' Tm: 59.258 Reverse Primer: 5'-GGTCCCTAGTCAAGGACATTGTCT-3' Tm: 59.038 Expected PCR Product Length: 273 Expected CelI Cleavage Product Sizes: 131, 142 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr10:13862482-13862533
Rank: 23 Homology Score: 13 TALEN Score: 57.47 Genomic Region: Intergenic Closest Gene: Fgfr2 Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTCTG CTCCACCCCAGCTCCAA AGGAAATGGCTGCCCATAAATC ACCAGAAAAACACCAAA GTCCC-3' 3'-AAGAC GAGGTGGGGTCGAGGTT TCCTTTACCGACGGGTATTTAG TGGTCTTTTTGTGGTTT CAGGG-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 001-189623849 Forward Primer: 5'-TGCATTCCCACCCCCATACTG-3' Tm: 59.378 Reverse Primer: 5'-CTGAGCACATTCAGGCATCTGG-3' Tm: 59.258 Expected PCR Product Length: 297 Expected CelI Cleavage Product Sizes: 131, 166 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:189623950-189624005
Rank: 24 Homology Score: 10 TALEN Score: 57.43 Genomic Region: Intergenic Closest Gene: Zfand6 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AGGAG TTCAGTCATGTTCAAGG GCACTTCTTGTGTAA ATGGGGCTGGACAGGGA GGAGT-3' 3'-TCCTC AAGTCAGTACAAGTTCC CGTGAAGAACACATT TACCCCGACCTGTCCCT CCTCA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 001-140972716 Forward Primer: 5'-GGGACCACCTCAGCTAAGGA-3' Tm: 59.508 Reverse Primer: 5'-GTGGGGTTGTTGGTTTTCAGCTC-3' Tm: 59.148 Expected PCR Product Length: 368 Expected CelI Cleavage Product Sizes: 173, 195 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:140972863-140972911
Rank: 25 Homology Score: 8 TALEN Score: 57.33 Genomic Region: Intergenic Closest Gene: Actrt1 Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATTTA TTAATTGTTGGTCTGAT TACCTATGTTATTA ATGGTTCTGTTCAGGAA GTTTT-3' 3'-TAAAT AATTAACAACCAGACTA ATGGATACAATAAT TACCAAGACAAGTCCTT CAAAA-5' TACCTCGACCCGTCCTT Left Nuclease Warning! Primer pair was generated using suboptimal parameters. Primer Index: 00X-131557987 Forward Primer: 5'-TTTTGGATGTCAGCTATAGGGTTGGAGAAAATCTT-3' Tm: 59.578 Reverse Primer: 5'-CAACAAATGATGCTAATCTAACTGGATGTCTACATG-3' Tm: 59.498 Expected PCR Product Length: 337 Expected CelI Cleavage Product Sizes: 131, 206 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:131558092-131558139
Rank: 26 Homology Score: 13 TALEN Score: 57.33 Genomic Region: Intergenic Closest Gene: Robo1 Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CTGTA GTCCTACCCAGCTTCAT TGTCTATGACACAACGATA ACCAGCACAGCACAGTA ACCTG-3' 3'-GACAT CAGGATGGGTCGAAGTA ACAGATACTGTGTTGCTAT TGGTCGTGTCGTGTCAT TGGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 011-011914436 Forward Primer: 5'-GACACAGTACTCAGAGGATCCAAG-3' Tm: 59.038 Reverse Primer: 5'-GCTTGGCTTCTAGGACCAGAC-3' Tm: 59.378 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 130, 140 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr11:11914538-11914590
Rank: 27 Homology Score: 10 TALEN Score: 57.26 Genomic Region: Intergenic Closest Gene: Pde4b Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTTCG TCCATTATTGTCATGGT GTCATGCAAGGTGAC ATGGTGCTGGGGAGGCA GCTGA-3' 3'-AAAGC AGGTAATAACAGTACCA CAGTACGTTCCACTG TACCACGACCCCTCCGT CGACT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 005-123636672 Forward Primer: 5'-CTCTGAGTGACACGAATTAGTGGG-3' Tm: 59.038 Reverse Primer: 5'-GGAGTGTGTCACTAAGGCTGG-3' Tm: 59.378 Expected PCR Product Length: 350 Expected CelI Cleavage Product Sizes: 218, 132 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:123636864-123636912
Rank: 28 Homology Score: 10 TALEN Score: 57.24 Genomic Region: Intergenic Closest Gene: Dpp6 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GTCAG TTCTGTGCTGTGCTCAT GCCATTGTGGGGAAG AAGGAGATGGGAAGGAA GGTGC-3' 3'-CAGTC AAGACACGACACGAGTA CGGTAACACCCCTTC TTCCTCTACCCTTCCTT CCACG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 004-003843423 Forward Primer: 5'-GGTGACCAATACCAACCATCAGG-3' Tm: 59.148 Reverse Primer: 5'-CCTCCTTTCAGGAAGGCTCTTTCT-3' Tm: 59.038 Expected PCR Product Length: 319 Expected CelI Cleavage Product Sizes: 169, 150 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:3843566-3843614
Rank: 29 Homology Score: 10 TALEN Score: 57.2 Genomic Region: Intergenic Closest Gene: Fundc1 Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AGACC TTCCTAACCCTTTCCAT TTGCTTAAATTAACAGAGA AACAGAACAATACTCAA AATTG-3' 3'-TCTGG AAGGATTGGGAAAGGTA AACGAATTTAATTGTCTCT TTGTCTTGTTATGAGTT TTAAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-016509931 Forward Primer: 5'-CTACCAATGTCTATGGAGTGACCG-3' Tm: 59.038 Reverse Primer: 5'-GCCTAGAGTATCCCAAATGTGCAC-3' Tm: 59.038 Expected PCR Product Length: 365 Expected CelI Cleavage Product Sizes: 130, 235 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:16510033-16510085
Rank: 30 Homology Score: 5 TALEN Score: 57.17 Genomic Region: Intergenic Closest Gene: Ccnc Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TCATA CTCAAGGTTGTTCTGAT GCAAACAACCTCCTC ATTGTTCTGGGTAGTAA ACAGA-3' 3'-AGTAT GAGTTCCAACAAGACTA CGTTTGTTGGAGGAG TAACAAGACCCATCATT TGTCT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 005-036123844 Forward Primer: 5'-GGCTGTAGACACTCTTCAGCTTG-3' Tm: 59.148 Reverse Primer: 5'-GTGACCTCTCTGCAGACAGC-3' Tm: 59.508 Expected PCR Product Length: 346 Expected CelI Cleavage Product Sizes: 140, 206 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:36123958-36124006
Rank: 31 Homology Score: 10 TALEN Score: 56.97 Genomic Region: Intergenic Closest Gene: Ttbk2 Match Type: L14R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GTGTT GCCACGCCCAGCTCCAC TTTCTAACCTCTAT ATCAGGACAACACTTAA TAAAT-3' 3'-CACAA CGGTGCGGGTCGAGGTG AAAGATTGGAGATA TAGTCCTGTTGTGAATT ATTTA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-107514838 Forward Primer: 5'-GTTGGCTTAAGGCTGCCAACTTC-3' Tm: 59.148 Reverse Primer: 5'-GTGTGTTGCCTCCTTTTCTACACG-3' Tm: 59.038 Expected PCR Product Length: 440 Expected CelI Cleavage Product Sizes: 234, 206 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:107515046-107515093
Rank: 32 Homology Score: 8 TALEN Score: 56.95 Genomic Region: Intron Closest Gene: Grm8 Match Type: L13R Left Nuclease TTCCTGCCCAGCTCCAT 5'-ACCCT TGCCTTCCCTGCTCCTT CTTCTCTGACTGT TCTAGCACAGCACTGAA AAAGA-3' 3'-TGGGA ACGGAAGGGACGAGGAA GAAGAGACTGACA AGATCGTGTCGTGACTT TTTCT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 004-054569528 Forward Primer: 5'-CTGTGAGCAAGCCAACAGATAGC-3' Tm: 59.148 Reverse Primer: 5'-CCTTGGAGTTGCTACAGGCTTTG-3' Tm: 59.148 Expected PCR Product Length: 273 Expected CelI Cleavage Product Sizes: 135, 138 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:54569638-54569684
Rank: 33 Homology Score: 13 TALEN Score: 56.87 Genomic Region: Intergenic Closest Gene: Fgf13 Match Type: L18R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CCTCG TTCCTGCTCTTCTCCAT GGACCACTTTGATGAGAT AAAAGAACAACACCCAA ACTGG-3' 3'-GGAGC AAGGACGAGAAGAGGTA CCTGGTGAAACTACTCTA TTTTCTTGTTGTGGGTT TGACC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-144712285 Forward Primer: 5'-CCAAGCGAGACAGAGATCGG-3' Tm: 59.508 Reverse Primer: 5'-GGTACTTGGCCCTCAGAATCG-3' Tm: 59.378 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 135, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:144712392-144712443
Rank: 34 Homology Score: 5 TALEN Score: 56.85 Genomic Region: Intergenic Closest Gene: Fyn Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGAGA TCCAGTTTTCTTCTTGT CAGGGGTGGGTGGG ATGGGGTGGGGTAGGTA GGAGA-3' 3'-CCTCT AGGTCAAAAGAAGAACA GTCCCCACCCACCC TACCCCACCCCATCCAT CCTCT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped. Primer Index: 020-043706993 Forward Primer: 5'-GCAGAAATGGATAGTTTGTGGGGG-3' Tm: 59.038 Reverse Primer: 5'-CCGCCAAGCCCTTTTTAAGTACTG-3' Tm: 59.038 Expected PCR Product Length: 378 Expected CelI Cleavage Product Sizes: 248, 130 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr20:43707215-43707262
Rank: 35 Homology Score: 10 TALEN Score: 56.83 Genomic Region: Intergenic Closest Gene: Tacstd2 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTCC TTCATTCTCTGCTTCAT TCATTGTGTCTGCATTTCCTTTAG ACAGGAACAACTCTGAA TTATT-3' 3'-AAAGG AAGTAAGAGACGAAGTA AGTAACACAGACGTAAAGGAAATC TGTCCTTGTTGAGACTT AATAA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 004-100499585 Forward Primer: 5'-GGCATAGCCTCTCAGGAAACAG-3' Tm: 59.258 Reverse Primer: 5'-CTTCCAGGACAGAACAGGAAAGAC-3' Tm: 59.038 Expected PCR Product Length: 336 Expected CelI Cleavage Product Sizes: 165, 171 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:100499719-100499776
Rank: 36 Homology Score: 10 TALEN Score: 56.7 Genomic Region: Intergenic Closest Gene: Zfp385b Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTCC TTCCAGCCCATCTCCAC TTCTTTATGCCAGCACTGA TCCACAGAAACACTGTA AACCA-3' 3'-AAAGG AAGGTCGGGTAGAGGTG AAGAAATACGGTCGTGACT AGGTGTCTTTGTGACAT TTGGT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-060396362 Forward Primer: 5'-CCACTGGGAGTGTATTCGGTATG-3' Tm: 59.148 Reverse Primer: 5'-GTAAACAGGCCTCTACAGAACGG-3' Tm: 59.148 Expected PCR Product Length: 362 Expected CelI Cleavage Product Sizes: 230, 132 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:60396564-60396616
Rank: 37 Homology Score: 13 TALEN Score: 56.64 Genomic Region: Intron Closest Gene: Ppm1l Match Type: L12R Left Nuclease TTCCTGCCCAGCTCCAT 5'-ACTCT TTCCTCCCAAGCTGCTT TTGGGCGGTTTT ACCACAATAACAGTGAA GCAAA-3' 3'-TGAGA AAGGAGGGTTCGACGAA AACCCGCCAAAA TGGTGTTATTGTCACTT CGTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 002-159432579 Forward Primer: 5'-GCTAAATCCCCAACCCTGCAG-3' Tm: 59.378 Reverse Primer: 5'-GTGTTTACTTGCTCAAACACCCGG-3' Tm: 59.038 Expected PCR Product Length: 284 Expected CelI Cleavage Product Sizes: 154, 130 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr2:159432708-159432753
Rank: 38 Homology Score: 5 TALEN Score: 56.64 Genomic Region: Intergenic Closest Gene: Ppp4r2 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TAAAT TTAAATTTTTTTCTGGA GGGTGATCACAGGGG TTGGAGTGGGGCAGGCA CAGCA-3' 3'-ATTTA AATTTAAAAAAAGACCT CCCACTAGTGTCCCC AACCTCACCCCGTCCGT GTCGT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 004-135905706 Forward Primer: 5'-GACAACGACTGCGTTCTATTTGGG-3' Tm: 59.038 Reverse Primer: 5'-TCACGAGCCCTGGTTATTGTTTGG-3' Tm: 59.038 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 134, 136 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:135905814-135905862
Rank: 39 Homology Score: 10 TALEN Score: 56.45 Genomic Region: Intron Closest Gene: Sorcs1 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TGATG CTGCTGCTCAACTCCCT TGCTAACAACTGAATACATCTGT ATCAGAACAACAGTGAG CAAAA-3' 3'-ACTAC GACGACGAGTTGAGGGA ACGATTGTTGACTTATGTAGACA TAGTCTTGTTGTCACTC GTTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 001-256112389 Forward Primer: 5'-CCTGGATAAGTCAGTAAAGGGTGG-3' Tm: 59.038 Reverse Primer: 5'-CCTTGGTGGGACCTGATACAGT-3' Tm: 59.258 Expected PCR Product Length: 353 Expected CelI Cleavage Product Sizes: 204, 149 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:256112563-256112619
Rank: 40 Homology Score: 5 TALEN Score: 56.44 Genomic Region: Intron Closest Gene: Pitpnm2 Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CCCTG ATCAGTGCAGTTCTAGT GGACCAGGGAGGGGTGTGCCA AGTGTGTTGGACAGGAA CAGAA-3' 3'-GGGAC TAGTCACGTCAAGATCA CCTGGTCCCTCCCCACACGGT TCACACAACCTGTCCTT GTCTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 012-033556886 Forward Primer: 5'-TCTGTCTGCAAGCTCCAGGG-3' Tm: 59.508 Reverse Primer: 5'-AACTCTGGCCTCCTTGGTCC-3' Tm: 59.508 Expected PCR Product Length: 277 Expected CelI Cleavage Product Sizes: 139, 138 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr12:33556996-33557050
Rank: 41 Homology Score: 8 TALEN Score: 56.35 Genomic Region: Intergenic Closest Gene: Rps29 Match Type: L16R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GCACA TTCCTCCACATTTCCAT CTCGAGGAAAGATTGG ATCAGATCAAGAGTGAA ACTCA-3' 3'-CGTGT AAGGAGGTGTAAAGGTA GAGCTCCTTTCTAACC TAGTCTAGTTCTCACTT TGAGT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 006-090557385 Forward Primer: 5'-GTCCCCACAGGCATATGATCG-3' Tm: 59.378 Reverse Primer: 5'-GTGCTTCGGGCAGTAGAGCT-3' Tm: 59.508 Expected PCR Product Length: 348 Expected CelI Cleavage Product Sizes: 217, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr6:90557575-90557624
Rank: 42 Homology Score: 10 TALEN Score: 56.34 Genomic Region: Exon Closest Gene: Lrp1 Match Type: R20L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GCTGT TTCAATCTTGGGGTGGT TCCCCCAGTCTGACCAGTAC ATGGTGCTGGGAAGGGA GAGAT-3' 3'-CGACA AAGTTAGAACCCCACCA AGGGGGTCAGACTGGTCATG TACCACGACCCTTCCCT CTCTA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 007-067524783 Forward Primer: 5'-TGATCAGAGCCTGCCCCTTC-3' Tm: 59.508 Reverse Primer: 5'-GACAGGGTGCTTCCTCACAATAC-3' Tm: 59.148 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 138, 132 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr7:67524892-67524945
Rank: 43 Homology Score: 10 TALEN Score: 56.31 Genomic Region: Intergenic Closest Gene: Rn45s Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGATC TGCCTTCTCAGATCCAA ATCCTCCATTTCAAGATGCAAGA AGCAGAGCCACACTGAA AGCTG-3' 3'-CCTAG ACGGAAGAGTCTAGGTT TAGGAGGTAAAGTTCTACGTTCT TCGTCTCGGTGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 0Un-021787610 Forward Primer: 5'-CCTGGGATGTGGTGTAAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-GAGGAGCCAAATCTGGACCATTAG-3' Tm: 59.038 Expected PCR Product Length: 273 Expected CelI Cleavage Product Sizes: 138, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn:21787718-21787774
Rank: 44 Homology Score: 10 TALEN Score: 56.31 Genomic Region: Intergenic Closest Gene: Cav2 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGATC TGCCTTCTCAGATCCAA ATCCTCCTTTTCAAGATGCAAGA AGCAGAGCCACACTGAA AGCTG-3' 3'-CCTAG ACGGAAGAGTCTAGGTT TAGGAGGAAAAGTTCTACGTTCT TCGTCTCGGTGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: dom-003376644 Forward Primer: 5'-CCTGGGATGTGGTGTAAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-GAGGAGCCAAATCTGGACCATTAG-3' Tm: 59.038 Expected PCR Product Length: 273 Expected CelI Cleavage Product Sizes: 138, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn_random:3376752-3376808
Rank: 45 Homology Score: 10 TALEN Score: 56.31 Genomic Region: Intergenic Closest Gene: LOC367515 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGATC TGCCTTCTCAGATCCAA ATCCTCCATTTCAAGATGCAAGA AGCAGAGCCACACTGAA AGCTG-3' 3'-CCTAG ACGGAAGAGTCTAGGTT TAGGAGGTAAAGTTCTACGTTCT TCGTCTCGGTGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped. Primer Index: 0Un-038608458 Forward Primer: 5'-CCTGGGATGTGGTGTAAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-GAGACAACATACCCTGCTCTCAC-3' Tm: 59.148 Expected PCR Product Length: 316 Expected CelI Cleavage Product Sizes: 138, 178 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn:38608566-38608622
Rank: 46 Homology Score: 10 TALEN Score: 56.31 Genomic Region: Intergenic Closest Gene: Adrbk2 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGATC TGCCTTCTCAGATCCAA ATCCTCCATTTCAAGATGCAAGA AGCAGAGCCACACTGAA AGCTG-3' 3'-CCTAG ACGGAAGAGTCTAGGTT TAGGAGGTAAAGTTCTACGTTCT TCGTCTCGGTGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 0Un-051334472 Forward Primer: 5'-CCTGGGATGTGGTGTAAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-GAGGAGCCAAATCTGGACCATTAG-3' Tm: 59.038 Expected PCR Product Length: 273 Expected CelI Cleavage Product Sizes: 138, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn:51334580-51334636
Rank: 47 Homology Score: 10 TALEN Score: 56.31 Genomic Region: Intergenic Closest Gene: LOC302022 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGATC TGCCTTCTCAGATCCAA ATCCTCCATTTCAAGATGCAAGA AGCAGAGCCACACTGAA AGCTG-3' 3'-CCTAG ACGGAAGAGTCTAGGTT TAGGAGGTAAAGTTCTACGTTCT TCGTCTCGGTGTGACTT TCGAC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 0Un-061148009 Forward Primer: 5'-CCTGGGATGTGGTGTAAGTTGG-3' Tm: 59.258 Reverse Primer: 5'-GAGACAACATACCCTGCTCTCAC-3' Tm: 59.148 Expected PCR Product Length: 316 Expected CelI Cleavage Product Sizes: 138, 178 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn:61148117-61148173
Rank: 48 Homology Score: 10 TALEN Score: 56.29 Genomic Region: Intergenic Closest Gene: Mctp2 Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AATCA TTCAGTGAATTTGTTGT GTCACATCTGCCCC ATGGAGGTGGGAGGGAA GAATA-3' 3'-TTAGT AAGTCACTTAAACAACA CAGTGTAGACGGGG TACCTCCACCCTCCCTT CTTAT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 001-127719260 Forward Primer: 5'-CCAACATTCTCCCAAGAGATTCTGGAAAC-3' Tm: 60.178 Reverse Primer: 5'-GTTCCAGGTCAACCAGGACTAC-3' Tm: 59.258 Expected PCR Product Length: 368 Expected CelI Cleavage Product Sizes: 135, 233 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:127719369-127719416
Rank: 49 Homology Score: 8 TALEN Score: 56.29 Genomic Region: Intron Closest Gene: Map2k1 Match Type: L15R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CAGCC TTCCTTCCCATCTACAG AAGAAATCAGCGAAG AGCAGAACTCCCCTGAA GTCAG-3' 3'-GTCGG AAGGAAGGGTAGATGTC TTCTTTAGTCGCTTC TCGTCTTGAGGGGACTT CAGTC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 008-068387105 Forward Primer: 5'-CCGACTAGCTTCTCCCATGAC-3' Tm: 59.378 Reverse Primer: 5'-TTACTGTCGGTGTCACAGTGCC-3' Tm: 59.258 Expected PCR Product Length: 322 Expected CelI Cleavage Product Sizes: 191, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:68387270-68387318
Rank: 50 Homology Score: 5 TALEN Score: 56.26 Genomic Region: Intron Closest Gene: Dcc Match Type: L20R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AATTC TTGCTACCCAGCCCAAT ATGGTATTTATATAAAAATA ATATGATCAACACTGGA TCTAA-3' 3'-TTAAG AACGATGGGTCGGGTTA TACCATAAATATATTTTTAT TATACTAGTTGTGACCT AGATT-5' TGGTCTTGTTGTGACTT Right Nuclease Warning! Primer pair was generated using suboptimal parameters. Primer Index: 018-068645313 Forward Primer: 5'-CTGGGAGCCTGGAAATTTGTCTG-3' Tm: 59.148 Reverse Primer: 5'-GGACACAAGCATATATTATTCTTTGGATGTGCTC-3' Tm: 59.668 Expected PCR Product Length: 439 Expected CelI Cleavage Product Sizes: 177, 262 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr18:68645461-68645514
Rank: 51 Homology Score: 10 TALEN Score: 56.25 Genomic Region: Promoter Closest Gene: Zfp830 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-ACCTC TGCCTGCCTAGCTCCAA AGCTAGTACCCGCATGTCTGCCAC ATCAAAACAATACTGTC TGCGA-3' 3'-TGGAG ACGGACGGATCGAGGTT TCGATCATGGGCGTACAGACGGTG TAGTTTTGTTATGACAG ACGCT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 010-070982895 Forward Primer: 5'-CAGGGTGTGTCTTTCCCAAGATAC-3' Tm: 59.038 Reverse Primer: 5'-GGGTCTCAGGAAACGTTGTGTTG-3' Tm: 59.148 Expected PCR Product Length: 366 Expected CelI Cleavage Product Sizes: 221, 145 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr10:70983085-70983142
Rank: 52 Homology Score: 8 TALEN Score: 56.21 Genomic Region: Intergenic Closest Gene: Stk17b Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TGGCA TTCCGTTTGGTCCTGGT TACTCCTGCTGACTCATTAGA ATTGAGCTGGCTGGGAA GGTAA-3' 3'-ACCGT AAGGCAAACCAGGACCA ATGAGGACGACTGAGTAATCT TAACTCGACCGACCCTT CCATT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 009-052013154 Forward Primer: 5'-GAGGCTGAGCTTGGCTTGCTT-3' Tm: 59.378 Reverse Primer: 5'-GCAAGGTCACATAGTGTCACTTGG-3' Tm: 59.038 Expected PCR Product Length: 311 Expected CelI Cleavage Product Sizes: 157, 154 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr9:52013282-52013336
Rank: 53 Homology Score: 5 TALEN Score: 56.14 Genomic Region: Intergenic Closest Gene: Grb14 Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AAGTG TTCAGAATAGTTCTGAG TACAATCACATTTAAAAATAG AGAGAGCGGGACAGGAA CAAAA-3' 3'-TTCAC AAGTCTTATCAAGACTC ATGTTAGTGTAAATTTTTATC TCTCTCGCCCTGTCCTT GTTTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 003-046502425 Forward Primer: 5'-GCCAAGGCTAAAGCAGTTTGGAAG-3' Tm: 59.038 Reverse Primer: 5'-GGAGGCACATTCTTAGGCTGCT-3' Tm: 59.258 Expected PCR Product Length: 289 Expected CelI Cleavage Product Sizes: 158, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:46502554-46502608
Rank: 54 Homology Score: 5 TALEN Score: 56.13 Genomic Region: Intergenic Closest Gene: Rnf217 Match Type: L17R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AAGAA TTCATACCAAACTCCAT ATCACCCTGTATATGAC AACATAGCACCACTAAA AGTCC-3' 3'-TTCTT AAGTATGGTTTGAGGTA TAGTGGGACATATACTG TTGTATCGTGGTGATTT TCAGG-5' TGGTCTTGTTGTGACTT Right Nuclease Warning! Primer pair was generated using suboptimal parameters. Primer Index: 001-026132578 Forward Primer: 5'-CATTCAGATACTCTGAAGCGAAACATGTTAAGG-3' Tm: 59.758 Reverse Primer: 5'-CCCCTGACCAATACTTTGCAAACG-3' Tm: 59.038 Expected PCR Product Length: 334 Expected CelI Cleavage Product Sizes: 148, 186 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:26132699-26132749
Rank: 55 Homology Score: 5 TALEN Score: 55.92 Genomic Region: Intron Closest Gene: Prickle2 Match Type: L13R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CCTGT TTCCTTCCCAAATCCCC TGACAAGACATAG AGCAGAAGAACATTTAA AATTA-3' 3'-GGACA AAGGAAGGGTTTAGGGG ACTGTTCTGTATC TCGTCTTCTTGTAAATT TTAAT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 004-126653383 Forward Primer: 5'-CCATGTGACCTTTGGACTACATGC-3' Tm: 59.038 Reverse Primer: 5'-GAGAGCCACTGACTACCATAACAC-3' Tm: 59.038 Expected PCR Product Length: 327 Expected CelI Cleavage Product Sizes: 145, 182 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:126653503-126653549
Rank: 56 Homology Score: 10 TALEN Score: 55.91 Genomic Region: Intergenic Closest Gene: Gabra2 Match Type: R19L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GCTGT TGCAGTTTAGTATTGGT ACGGAGGTCCTGGGAAGGC ATTGCTCTGGGCAGGAA ATAAG-3' 3'-CGACA ACGTCAAATCATAACCA TGCCTCCAGGACCCTTCCG TAACGAGACCCGTCCTT TATTC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 014-039438747 Forward Primer: 5'-GCTCCATAAACTGGGCCTGAGA-3' Tm: 59.258 Reverse Primer: 5'-GCTAGCCTCTACCTCTTCCTG-3' Tm: 59.378 Expected PCR Product Length: 342 Expected CelI Cleavage Product Sizes: 144, 198 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr14:39438863-39438915
Rank: 57 Homology Score: 10 TALEN Score: 55.9 Genomic Region: Intron Closest Gene: Fra10ac1 Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TCAAG TTCCTAGCCAGCTTCAT TCACAGAGCAAGTTCCAGGACA GCCAGGGCTACACAGAA AAACT-3' 3'-AGTTC AAGGATCGGTCGAAGTA AGTGTCTCGTTCAAGGTCCTGT CGGTCCCGATGTGTCTT TTTGA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 001-242536006 Forward Primer: 5'-TGGAGGTTGGGAGAGTAGAGG-3' Tm: 59.378 Reverse Primer: 5'-TGAAGGAGGGAACACTCAGCAG-3' Tm: 59.258 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 135, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:242536111-242536166
Rank: 58 Homology Score: 2 TALEN Score: 55.85 Genomic Region: Intron Closest Gene: LOC246295 Match Type: L20R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TGTGC TTTCCACACAGCACCAT GCAGCCTCAGTCACCAGGCC TCTAGAACAGCATTGTA ACAGG-3' 3'-ACACG AAAGGTGTGTCGTGGTA CGTCGGAGTCAGTGGTCCGG AGATCTTGTCGTAACAT TGTCC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 005-170773963 Forward Primer: 5'-CCAAGGTTGCTGCCAGTTCAGCT-3' Tm: 61.088 Reverse Primer: 5'-AGGAGCTGGAGAGCCAAGTG-3' Tm: 59.508 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 135, 135 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:170774069-170774122
Rank: 59 Homology Score: 10 TALEN Score: 55.83 Genomic Region: Intergenic Closest Gene: Cntnap5b Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CTCTT TCTCTTCCTAGCTCCCT GCAATTGTATCCTGCTGTGAGT ACCAGATCAAAAGTGAA TATTT-3' 3'-GAGAA AGAGAAGGATCGAGGGA CGTTAACATAGGACGACACTCA TGGTCTAGTTTTCACTT ATAAA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 013-002441765 Forward Primer: 5'-CTGTCTCTGTCTCTCTTAGTTCCC-3' Tm: 59.038 Reverse Primer: 5'-CCCTTTTTGCCTTTCCATGCAGTG-3' Tm: 59.038 Expected PCR Product Length: 336 Expected CelI Cleavage Product Sizes: 177, 159 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr13:2441912-2441967
Rank: 60 Homology Score: 8 TALEN Score: 55.82 Genomic Region: Intergenic Closest Gene: Lamp5 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-ATACC TTCCACCCCACCTCCTT CCCCTAGATTTCAAGAAGGGGGGA AGCAGAACAAAACCTAA CCTCG-3' 3'-TATGG AAGGTGGGGTGGAGGAA GGGGATCTAAAGTTCTTCCCCCCT TCGTCTTGTTTTGGATT GGAGC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-124119953 Forward Primer: 5'-CAGTAGCTGCCTTTGACCAGGA-3' Tm: 59.258 Reverse Primer: 5'-CAAACCAGACAATGGCTTCTGCTC-3' Tm: 59.038 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 140, 130 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:124120062-124120119
Rank: 61 Homology Score: 8 TALEN Score: 55.78 Genomic Region: Intergenic Closest Gene: Sfrp2 Match Type: L13R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TCATG TACCAGCCCAGCTGCAG TCCAGCTTCTATG TCCAGCACTGCACTGAA ACTGT-3' 3'-AGTAC ATGGTCGGGTCGACGTC AGGTCGAAGATAC AGGTCGTGACGTGACTT TGACA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 002-175409656 Forward Primer: 5'-CATCGGGCAGGGTTTCAAAGC-3' Tm: 59.378 Reverse Primer: 5'-GCCCAAGCTGACATTTGAGAGAC-3' Tm: 59.148 Expected PCR Product Length: 303 Expected CelI Cleavage Product Sizes: 159, 144 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr2:175409790-175409836
Rank: 62 Homology Score: 5 TALEN Score: 55.75 Genomic Region: Intergenic Closest Gene: Slc15a5 Match Type: L20R Left Nuclease TTCCTGCCCAGCTCCAT 5'-CGTTA TTAATGCACAGCCCCAT AAAAACATTGATTTAGAGGA ACCTTTATAACATTGAA GTGCA-3' 3'-GCAAT AATTACGTGTCGGGGTA TTTTTGTAACTAAATCTCCT TGGAAATATTGTAACTT CACGT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 004-174994043 Forward Primer: 5'-GTGCGGCTCTGTCCTCACAT-3' Tm: 59.508 Reverse Primer: 5'-GATTAAATTGCATGCAGCTGCACTAACTCC-3' Tm: 60.058 Expected PCR Product Length: 269 Expected CelI Cleavage Product Sizes: 138, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:174994152-174994205
Rank: 63 Homology Score: 5 TALEN Score: 55.74 Genomic Region: Intergenic Closest Gene: Hmg20a Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTCAT TTCATGAACAGCTACTT GGCGCTCTGTCTTCTAGTG ATCAGTAAAACACGGAA GTCTT-3' 3'-AAGTA AAGTACTTGTCGATGAA CCGCGAGACAGAAGATCAC TAGTCATTTTGTGCCTT CAGAA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 008-060163371 Forward Primer: 5'-TGGTCAATGTCCTTGGGGCTG-3' Tm: 59.378 Reverse Primer: 5'-CGAGTCTTTCTAGCCAGTCAAGTG-3' Tm: 59.038 Expected PCR Product Length: 279 Expected CelI Cleavage Product Sizes: 130, 149 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:60163473-60163525
Rank: 64 Homology Score: 5 TALEN Score: 55.74 Genomic Region: Intergenic Closest Gene: Lingo1 Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTCAT TTCATGAACAGCTACTT GGCGCTCTGTCTTCTAGTG ATCAGTAAAACACGGAA GTCTT-3' 3'-AAGTA AAGTACTTGTCGATGAA CCGCGAGACAGAAGATCAC TAGTCATTTTGTGCCTT CAGAA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 008-060289566 Forward Primer: 5'-TGGTCAATGTCCTTGGGGCTG-3' Tm: 59.378 Reverse Primer: 5'-CGAGTCTTTCTAGCCAGTCAAGTG-3' Tm: 59.038 Expected PCR Product Length: 279 Expected CelI Cleavage Product Sizes: 130, 149 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:60289668-60289720
Rank: 65 Homology Score: 13 TALEN Score: 55.73 Genomic Region: Intron Closest Gene: Usp30 Match Type: R24L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CCCAG TTCAGTGTTGGGATGGT GGCAGGATACACAGAGGCTTGGCA GTGCAGCTGGGGAGGAT GTGTG-3' 3'-GGGTC AAGTCACAACCCTACCA CCGTCCTATGTGTCTCCGAACCGT CACGTCGACCCCTCCTA CACAC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 012-043552977 Forward Primer: 5'-CACCCACTTCATGTTGGAAACGC-3' Tm: 59.148 Reverse Primer: 5'-TTCCAAACCCTCTGCCCTGC-3' Tm: 59.508 Expected PCR Product Length: 278 Expected CelI Cleavage Product Sizes: 131, 147 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr12:43553077-43553134
Rank: 66 Homology Score: 10 TALEN Score: 55.67 Genomic Region: Intergenic Closest Gene: Tbl1xr1 Match Type: R22L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ACATC TCCAGTCTTATTCTGGT CTATTATCAACAGTAAGGGAAA ATGAAGCTGCCATGGAA AGTAC-3' 3'-TGTAG AGGTCAGAATAAGACCA GATAATAGTTGTCATTCCCTTT TACTTCGACGGTACCTT TCATG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 002-106965669 Forward Primer: 5'-ATAGTGGCCAGTGCCTGGAC-3' Tm: 59.508 Reverse Primer: 5'-CCAGGAGAAAAGGCCATCTTCCA-3' Tm: 59.148 Expected PCR Product Length: 307 Expected CelI Cleavage Product Sizes: 131, 176 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr2:106965770-106965825
Rank: 67 Homology Score: 10 TALEN Score: 55.65 Genomic Region: Intron Closest Gene: Tgfbr1 Match Type: L12R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AAAAT ATCCTTCCAGGCTTCAT TAAGTAACTTAG ACCAGATAAACACTTAA CCAAG-3' 3'-TTTTA TAGGAAGGTCCGAAGTA ATTCATTGAATC TGGTCTATTTGTGAATT GGTTC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 005-063999032 Forward Primer: 5'-CAGGAGCAAGACAAGAGTGTCTAC-3' Tm: 59.038 Reverse Primer: 5'-CGGTTAGTGTGGGATGTCTTTCTC-3' Tm: 59.038 Expected PCR Product Length: 361 Expected CelI Cleavage Product Sizes: 138, 223 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:63999145-63999190
Rank: 68 Homology Score: 10 TALEN Score: 55.65 Genomic Region: Intergenic Closest Gene: Irx1 Match Type: R22L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGTTT TTCTGTGTAGTTCTGGC TGTCCTGGAACTGAATCAGTAG ATGAGGCTGGCCTTGAA CTCAA-3' 3'-CCAAA AAGACACATCAAGACCG ACAGGACCTTGACTTAGTCATC TACTCCGACCGGAACTT GAGTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 0Un-075352159 Forward Primer: 5'-CTTGAGAGACTGTGGTGAATGAGG-3' Tm: 59.038 Reverse Primer: 5'-GGAGGAAAAAGGGGACTGTGTTCA-3' Tm: 59.038 Expected PCR Product Length: 298 Expected CelI Cleavage Product Sizes: 150, 148 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrUn:75352279-75352334
Rank: 69 Homology Score: 10 TALEN Score: 55.65 Genomic Region: Intergenic Closest Gene: Grid2 Match Type: R22L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGTTT TTCTGTGTAGTTCTGGC TGTCCTGGAACTGAATCAGTAG ATGAGGCTGGCCTTGAA CTCAA-3' 3'-CCAAA AAGACACATCAAGACCG ACAGGACCTTGACTTAGTCATC TACTCCGACCGGAACTT GAGTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 004-092024652 Forward Primer: 5'-CTTGAGAGACTGTGGTGAATGAGG-3' Tm: 59.038 Reverse Primer: 5'-GGAGGAAAAAGGGGACTGTGTTCA-3' Tm: 59.038 Expected PCR Product Length: 298 Expected CelI Cleavage Product Sizes: 150, 148 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:92024772-92024827
Rank: 70 Homology Score: 5 TALEN Score: 55.61 Genomic Region: Intergenic Closest Gene: Tasp1 Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TGTCT TTCAGTTTTGTTGTACT GAGAGAGAAAGAGA ATGAAGTTGGGTGGGTA GGAGG-3' 3'-ACAGA AAGTCAAAACAACATGA CTCTCTCTTTCTCT TACTTCAACCCACCCAT CCTCC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 003-128243778 Forward Primer: 5'-CAACCACACTGCAGACCAGG-3' Tm: 59.508 Reverse Primer: 5'-GCCATGGATCTGATATTGGTGGCT-3' Tm: 59.038 Expected PCR Product Length: 308 Expected CelI Cleavage Product Sizes: 131, 177 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:128243883-128243930
Rank: 71 Homology Score: 10 TALEN Score: 55.58 Genomic Region: Intergenic Closest Gene: Uncx Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GAGTC TTTCTGCCCAGCTCTAG CTGTCCTGGAACTCACCCTGTAG ACCAGGCCAGCCTTGAA CTCAC-3' 3'-CTCAG AAAGACGGGTCGAGATC GACAGGACCTTGAGTGGGACATC TGGTCCGGTCGGAACTT GAGTG-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 012-015478690 Forward Primer: 5'-CCACTCAAGACAAGCAGAAAGGAC-3' Tm: 59.038 Reverse Primer: 5'-CAAAACAGCAGCAGCAAAAGCTGG-3' Tm: 59.038 Expected PCR Product Length: 278 Expected CelI Cleavage Product Sizes: 147, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr12:15478807-15478863
Rank: 72 Homology Score: 8 TALEN Score: 55.53 Genomic Region: Intergenic Closest Gene: Clec14a Match Type: L17R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AGGTC TTGCTGCCCATCTTCAA TAAGCCAAGAGAAAAGA ACCAGCTTAACAGTGAA AAGTA-3' 3'-TCCAG AACGACGGGTAGAAGTT ATTCGGTTCTCTTTTCT TGGTCGAATTGTCACTT TTCAT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 006-079162173 Forward Primer: 5'-ACACAGAAGGCTCTCCAGAGAC-3' Tm: 59.258 Reverse Primer: 5'-ACTTTGATCTCACTTCAGGTCCCC-3' Tm: 59.038 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 138, 132 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr6:79162284-79162334
Rank: 73 Homology Score: 8 TALEN Score: 55.51 Genomic Region: Intron Closest Gene: Bai1 Match Type: R20L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CCATG TTCTGTGTTGTCTTTGT TTCTTTGTTGTTAAACTGGG ATGGGGAGGGGCAGGTA CGCTT-3' 3'-GGTAC AAGACACAACAGAAACA AAGAAACAACAATTTGACCC TACCCCTCCCCGTCCAT GCGAA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 007-112677493 Forward Primer: 5'-TAGGGCAGAGCTGATGGACC-3' Tm: 59.508 Reverse Primer: 5'-CGAGTCTCTTCTTGACTGTTTCCC-3' Tm: 59.038 Expected PCR Product Length: 274 Expected CelI Cleavage Product Sizes: 137, 137 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr7:112677601-112677654
Rank: 74 Homology Score: 10 TALEN Score: 55.51 Genomic Region: Intron Closest Gene: Tm6sf1 Match Type: R13L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CTTTG TTCAGTTTTTTTTTTTT TTTTTTTCTTTTT TTGGAGCTGGGAACGAA CCCAG-3' 3'-GAAAC AAGTCAAAAAAAAAAAA AAAAAAAGAAAAA AACCTCGACCCTTGCTT GGGTC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped. Primer Index: 001-138061468 Forward Primer: 5'-CCGTGAAGCAGGTCACAAAGC-3' Tm: 59.378 Reverse Primer: 5'-CAGCAAGGGAAGTGCTACTTGATG-3' Tm: 59.038 Expected PCR Product Length: 303 Expected CelI Cleavage Product Sizes: 164, 139 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:138061607-138061653
Rank: 75 Homology Score: 5 TALEN Score: 55.45 Genomic Region: Intergenic Closest Gene: Tesl Match Type: R24L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TCCTA TTTAGTGTTGCTATTGC TGTGGTAAAACACTACAACCAACC ATTGGGTTGGGAAGGAA CGGGT-3' 3'-AGGAT AAATCACAACGATAACG ACACCATTTTGTGATGTTGGTTGG TAACCCAACCCTTCCTT GCCCA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-010426535 Forward Primer: 5'-GTTCTCTGCATCCATGCCATGTG-3' Tm: 59.148 Reverse Primer: 5'-CCTCAGCATCAGTTACTGCTTCC-3' Tm: 59.148 Expected PCR Product Length: 383 Expected CelI Cleavage Product Sizes: 252, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:10426756-10426813
Rank: 76 Homology Score: 5 TALEN Score: 55.45 Genomic Region: Intron Closest Gene: Myh1 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GTTCT TTCCTGCAAAGATCAAG TAAGTCTTGGAGTCTGTATTGTTA ACAAGATTAACAATGAA GTAGT-3' 3'-CAAGA AAGGACGTTTCTAGTTC ATTCAGAACCTCAGACATAACAAT TGTTCTAATTGTTACTT CATCA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 010-053902466 Forward Primer: 5'-CCCATTACCACCCTCCCCTA-3' Tm: 59.508 Reverse Primer: 5'-AGGGAGACAAATGAGGGTTTTGTCCTTC-3' Tm: 60.298 Expected PCR Product Length: 377 Expected CelI Cleavage Product Sizes: 247, 130 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr10:53902682-53902739
Rank: 77 Homology Score: 13 TALEN Score: 55.45 Genomic Region: Promoter Closest Gene: Cln5 Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AGTGT TTTATTGTTGTTATGGT TTGGCTGGTGGTGG CTGCAGGTGGGCAGAAA GCACC-3' 3'-TCACA AAATAACAACAATACCA AACCGACCACCACC GACGTCCACCCGTCTTT CGTGG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 015-087079625 Forward Primer: 5'-CAATCACTCCCTGCAATCCCC-3' Tm: 59.378 Reverse Primer: 5'-TGACGCCTCCACTGTCCTAG-3' Tm: 59.508 Expected PCR Product Length: 326 Expected CelI Cleavage Product Sizes: 142, 184 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr15:87079741-87079788
Rank: 78 Homology Score: 5 TALEN Score: 55.43 Genomic Region: Intergenic Closest Gene: Cyp2r1 Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TCTCC TTCAATCTCTGCTCCAT TTCTTGTCCCTGCATTTCCTTTAG ACAAGAACAATTCTGGA TCAAA-3' 3'-AGAGG AAGTTAGAGACGAGGTA AAGAACAGGGACGTAAAGGAAATC TGTTCTTGTTAAGACCT AGTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 001-172645535 Forward Primer: 5'-CTCCTGTTTGCAAGCACATCTTGG-3' Tm: 59.038 Reverse Primer: 5'-CTGAAATGTCCAACAGTGGGGC-3' Tm: 59.258 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 133, 137 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:172645637-172645694
Rank: 79 Homology Score: 10 TALEN Score: 55.42 Genomic Region: Intergenic Closest Gene: E2f3 Match Type: R20L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTTTG TGCTGTGCTGTGCTGGG CACAGAACCCAGGGCAGAGG AGCGTGCTGGGCAGGAA CCCAA-3' 3'-AAAAC ACGACACGACACGACCC GTGTCTTGGGTCCCGTCTCC TCGCACGACCCGTCCTT GGGTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 017-041218534 Forward Primer: 5'-CCAGGCCATGATTATTCTGCAGG-3' Tm: 59.148 Reverse Primer: 5'-TCCCAAGTCACCTGCAAGCC-3' Tm: 59.508 Expected PCR Product Length: 343 Expected CelI Cleavage Product Sizes: 212, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr17:41218717-41218770
Rank: 80 Homology Score: 8 TALEN Score: 55.4 Genomic Region: Intergenic Closest Gene: Mir100 Match Type: L12R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AGTAC TTCAAGACCAGCTCCTT TGAATCGTTCTC CCCAGAACAAGGCTGCA CCTGA-3' 3'-TCATG AAGTTCTGGTCGAGGAA ACTTAGCAAGAG GGGTCTTGTTCCGACGT GGACT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 008-044521883 Forward Primer: 5'-CAGAGGACCTGTGAGAGACAGT-3' Tm: 59.258 Reverse Primer: 5'-GAAGCAAATGTGAGAGGAAAAGCCTTGATG-3' Tm: 60.058 Expected PCR Product Length: 439 Expected CelI Cleavage Product Sizes: 308, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:44522166-44522211
Rank: 81 Homology Score: 10 TALEN Score: 55.39 Genomic Region: Intron Closest Gene: Ube2j1 Match Type: L21R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTGCT TTCCTTTCCAGCTCCTT CTGCCTCTCTTAGGCATTTCC AGCAGAGCCACTCTGCA ATGGT-3' 3'-AACGA AAGGAAAGGTCGAGGAA GACGGAGAGAATCCGTAAAGG TCGTCTCGGTGAGACGT TACCA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 005-049320556 Forward Primer: 5'-CTGTGGTGAAGGTGTTACTGTGTC-3' Tm: 59.038 Reverse Primer: 5'-GAGAAGGCTGGACCGAATAGAAG-3' Tm: 59.148 Expected PCR Product Length: 292 Expected CelI Cleavage Product Sizes: 161, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:49320688-49320742
Rank: 82 Homology Score: 5 TALEN Score: 55.37 Genomic Region: Intergenic Closest Gene: Tmem132b Match Type: R20L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGACC TTCACTGTGATTCTTTT GTGCATTCAAAAACATCCAC TTGGGGCTGGGAAGGTA CCTCG-3' 3'-CCTGG AAGTGACACTAAGAAAA CACGTAAGTTTTTGTAGGTG AACCCCGACCCTTCCAT GGAGC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 012-031851371 Forward Primer: 5'-GGGTGCCTGACTGCTATATTTCC-3' Tm: 59.148 Reverse Primer: 5'-TTGCCTGCCACAACCATGCATC-3' Tm: 59.258 Expected PCR Product Length: 298 Expected CelI Cleavage Product Sizes: 168, 130 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr12:31851510-31851563
Rank: 83 Homology Score: 5 TALEN Score: 55.35 Genomic Region: Intergenic Closest Gene: Slc7a11 Match Type: R15L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TTTGT TTCATTTTTGTTTTTGT TGTGAGAGACAGAAT ATGAAGTTGGGTGGGTA ATAAG-3' 3'-AAACA AAGTAAAAACAAAAACA ACACTCTCTGTCTTA TACTTCAACCCACCCAT TATTC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped. Primer Index: 002-139129605 Forward Primer: 5'-CCCATGTGCAGAAGGAGTTGTAC-3' Tm: 59.148 Reverse Primer: 5'-GTTCCAGGTCAGTCAGGGATATAC-3' Tm: 59.038 Expected PCR Product Length: 358 Expected CelI Cleavage Product Sizes: 175, 183 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr2:139129754-139129802
Rank: 84 Homology Score: 10 TALEN Score: 55.29 Genomic Region: Intergenic Closest Gene: Cldn8 Match Type: R21L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CTCTG TTCTGTGTTCTGTTGGG AGTTAAATCAAACGTATTTTC ATGGAGCTTGGCATGTA GAAAA-3' 3'-GAGAC AAGACACAAGACAACCC TCAATTTAGTTTGCATAAAAG TACCTCGAACCGTACAT CTTTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 011-028431745 Forward Primer: 5'-GCTCAGAACAGCTAATGTGAGTGC-3' Tm: 59.038 Reverse Primer: 5'-CAATGACTGTCCAGAACTGAGGC-3' Tm: 59.148 Expected PCR Product Length: 314 Expected CelI Cleavage Product Sizes: 177, 137 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr11:28431893-28431947
Rank: 85 Homology Score: 8 TALEN Score: 55.28 Genomic Region: Intergenic Closest Gene: Rgs10 Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AATTT TCTCTGCCCACCTCCGT TGAAAGCATCCCCCCAAGGCTG ATCACAAATACACTGAA GCTAA-3' 3'-TTAAA AGAGACGGGTGGAGGCA ACTTTCGTAGGGGGGTTCCGAC TAGTGTTTATGTGACTT CGATT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 001-187665749 Forward Primer: 5'-GGAGGGAAGGAGGGAAGGAA-3' Tm: 59.508 Reverse Primer: 5'-ACACCAGTCTTGCTGAGGGC-3' Tm: 59.508 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 132, 138 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:187665851-187665906
Rank: 86 Homology Score: 10 TALEN Score: 55.27 Genomic Region: Intron Closest Gene: Asip Match Type: L22R Left Nuclease TTCCTGCCCAGCTCCAT 5'-AGGTT TCCCTGCGCTGCCTCAT GATTAAGTTAACATTATTTTTA GCAAGAACAACACAGAA GGGAT-3' 3'-TCCAA AGGGACGCGACGGAGTA CTAATTCAATTGTAATAAAAAT CGTTCTTGTTGTGTCTT CCCTA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-145456877 Forward Primer: 5'-GGCGACAGTTCCTCTGTTTTTGC-3' Tm: 59.148 Reverse Primer: 5'-CACAGTAGTGGCTGTAGGCATTTG-3' Tm: 59.038 Expected PCR Product Length: 375 Expected CelI Cleavage Product Sizes: 173, 202 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:145457020-145457075
Rank: 87 Homology Score: 5 TALEN Score: 55.23 Genomic Region: Intergenic Closest Gene: Snrk Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGCCT TTCCTTCACTGCTCCAC TCTTTGTCTCTGCATATCCTTTTG ACAGGAACAATTCTGGA TTAAT-3' 3'-CCGGA AAGGAAGTGACGAGGTG AGAAACAGAGACGTATAGGAAAAC TGTCCTTGTTAAGACCT AATTA-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped. Primer Index: 00X-105203723 Forward Primer: 5'-CAGGTTCCTGTCAGCAAGTGTTTC-3' Tm: 59.038 Reverse Primer: 5'-GGGTTCAAATCCCCAAGGCTAC-3' Tm: 59.258 Expected PCR Product Length: 393 Expected CelI Cleavage Product Sizes: 133, 260 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:105203825-105203882
Rank: 88 Homology Score: 10 TALEN Score: 55.23 Genomic Region: Intron Closest Gene: Cntn4 Match Type: L20R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTATC TACCTTCCCAGCCCCAT TATGCATGGGTACAACATAA ACCAACACAAAACAAAA GCAAA-3' 3'-AATAG ATGGAAGGGTCGGGGTA ATACGTACCCATGTTGTATT TGGTTGTGTTTTGTTTT CGTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 004-141883124 Forward Primer: 5'-AATCCGCAGTCTAAGCCAACAGAG-3' Tm: 59.038 Reverse Primer: 5'-TGCTAGGCAAGCACTCTACCAC-3' Tm: 59.258 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 134, 136 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr4:141883229-141883282
Rank: 89 Homology Score: 5 TALEN Score: 55.18 Genomic Region: Intergenic Closest Gene: Aldh8a1 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTCT TTCAGTCTCTGCTCCAT TTTTGTCCCTGAATGTTCTTTAG ACTAGAACAATTCTGAG TAAAC-3' 3'-AAAGA AAGTCAGAGACGAGGTA AAAACAGGGACTTACAAGAAATC TGATCTTGTTAAGACTC ATTTG-5' TGGTCTTGTTGTGACTT Right Nuclease No Primers Primer Index: No Primers Forward Primer: 5'-No Primers-3' Tm: No Primers Reverse Primer: 5'-No Primers-3' Tm: No Primers Expected PCR Product Length: No Primers Expected CelI Cleavage Product Sizes: No Primers, No Primers In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:16859003-16859059
Rank: 90 Homology Score: 8 TALEN Score: 55.17 Genomic Region: Intergenic Closest Gene: Amigo2 Match Type: R18L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGTTC TTCAGTGATGTACTGCA TCAGGATGTGTAAGACAG ATGAACCTGGGCTGGAG AGATG-3' 3'-CCAAG AAGTCACTACATGACGT AGTCCTACACATTCTGTC TACTTGGACCCGACCTC TCTAC-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 007-135956125 Forward Primer: 5'-CACTCCTACGTAGGTATCTTGGG-3' Tm: 59.148 Reverse Primer: 5'-CTCACCAGAAGAGGGCATCAAATC-3' Tm: 59.038 Expected PCR Product Length: 280 Expected CelI Cleavage Product Sizes: 137, 143 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr7:135956234-135956285
Rank: 91 Homology Score: 5 TALEN Score: 55.16 Genomic Region: Intergenic Closest Gene: RGD1561230 Match Type: R12L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATTCT ATCAATGATGTTCTTGT AGAGACTAATAC ATGGCTCTTGTCATGAA AAGTT-3' 3'-TAAGA TAGTTACTACAAGAACA TCTCTGATTATG TACCGAGAACAGTACTT TTCAA-5' TACCTCGACCCGTCCTT Left Nuclease Warning! Primer pair was generated using suboptimal parameters. Primer Index: 00X-116419128 Forward Primer: 5'-CATGGTCATGACCTTACACAATATGTTACCC-3' Tm: 59.958 Reverse Primer: 5'-CCTCATGAGAAGTAGGCTCAAGGA-3' Tm: 59.038 Expected PCR Product Length: 370 Expected CelI Cleavage Product Sizes: 185, 185 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:116419288-116419333
Rank: 92 Homology Score: 10 TALEN Score: 55.11 Genomic Region: Intergenic Closest Gene: Mir3589 Match Type: R22L Right Nuclease TTCAGTGTTGTTCTGGT 5'-CTTTG TAGACTGTGGTTCTGCT GATTGTGGGATGACAGAAAGGA ATGGAGATGGGCTAGAA GTCCA-3' 3'-GAAAC ATCTGACACCAAGACGA CTAACACCCTACTGTCTTTCCT TACCTCTACCCGATCTT CAGGT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-146103263 Forward Primer: 5'-CTACACTCCTTTTTGTTGGGTGGG-3' Tm: 59.038 Reverse Primer: 5'-CTCTGCTGCAGAGCCTTTTTTCC-3' Tm: 59.148 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 136, 134 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:146103369-146103424
Rank: 93 Homology Score: 5 TALEN Score: 55.08 Genomic Region: Intergenic Closest Gene: Pappa Match Type: L24R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTCTC TACCTCCCCACCCCCAT TGCTATGGTTTTGCTCCCTGCATT TCCAGCACAATACAGTA GTGCG-3' 3'-AAGAG ATGGAGGGGTGGGGGTA ACGATACCAAAACGAGGGACGTAA AGGTCGTGTTATGTCAT CACGC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 005-082146486 Forward Primer: 5'-GCCAGAGGCCCTGGTCTTAT-3' Tm: 59.508 Reverse Primer: 5'-CTCCATTCCCTACTACAGAGAGTG-3' Tm: 59.038 Expected PCR Product Length: 278 Expected CelI Cleavage Product Sizes: 137, 141 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr5:82146592-82146649
Rank: 94 Homology Score: 5 TALEN Score: 55.08 Genomic Region: Intergenic Closest Gene: Fgf12 Match Type: R18L Right Nuclease TTCAGTGTTGTTCTGGT 5'-TATTC TTCAGTGTAATTCTTGC CCTATAAATTTATGTTCT CTGGAGGGTGGCAGAAA ATGTA-3' 3'-ATAAG AAGTCACATTAAGAACG GGATATTTAAATACAAGA GACCTCCCACCGTCTTT TACAT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 011-074482637 Forward Primer: 5'-ACAGACTTTGCAGAAGATCTAAGCCCTC-3' Tm: 60.298 Reverse Primer: 5'-GTCCTGGAAGTGACAGGTGTAC-3' Tm: 59.258 Expected PCR Product Length: 408 Expected CelI Cleavage Product Sizes: 131, 277 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr11:74482740-74482791
Rank: 95 Homology Score: 5 TALEN Score: 55.03 Genomic Region: Intergenic Closest Gene: RGD1561065 Match Type: R24L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGATA TGCATTGATGTACTGTT GCTGTGACAAAATTCTATGACCAA AGCGAGTTGGGGAGGAA AGGGT-3' 3'-CCTAT ACGTAACTACATGACAA CGACACTGTTTTAAGATACTGGTT TCGCTCAACCCCTCCTT TCCCA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 00X-040773744 Forward Primer: 5'-GGGTGAAACAGCATGTGGCATC-3' Tm: 59.258 Reverse Primer: 5'-GGTCCTATTAACTCCTACCTCCAG-3' Tm: 59.038 Expected PCR Product Length: 441 Expected CelI Cleavage Product Sizes: 310, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chrX:40774023-40774080
Rank: 96 Homology Score: 5 TALEN Score: 55.02 Genomic Region: Intron Closest Gene: Scn3a Match Type: L19R Left Nuclease TTCCTGCCCAGCTCCAT 5'-GGCAC TTCCCTCCCACCACCAC CAATCATACACCTTACTCC AACTGGACAAAACTGAA ACAAA-3' 3'-CCGTG AAGGGAGGGTGGTGGTG GTTAGTATGTGGAATGAGG TTGACCTGTTTTGACTT TGTTT-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 003-048025715 Forward Primer: 5'-ACTGTCACACTGCTGTCACGG-3' Tm: 59.378 Reverse Primer: 5'-GACTGTCTTCGCAATAGGGTTATCTCATC-3' Tm: 60.178 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 131, 139 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr3:48025818-48025870
Rank: 97 Homology Score: 5 TALEN Score: 54.97 Genomic Region: Intergenic Closest Gene: Irak1bp1 Match Type: R22L Right Nuclease TTCAGTGTTGTTCTGGT 5'-GGCTC TCCAGTATTGAGCTGGA GACTGGAGGTTCCTGAAAGAGC ATGGTGCAGGTCAGGCA GTTTC-3' 3'-CCGAG AGGTCATAACTCGACCT CTGACCTCCAAGGACTTTCTCG TACCACGTCCAGTCCGT CAAAG-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 008-087710971 Forward Primer: 5'-GTGGCTTATGGGTCGATGACCACA-3' Tm: 60.908 Reverse Primer: 5'-CTGCAGACTGCAAGGTTGTTCC-3' Tm: 59.258 Expected PCR Product Length: 315 Expected CelI Cleavage Product Sizes: 131, 184 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr8:87711072-87711127
Rank: 98 Homology Score: 5 TALEN Score: 54.95 Genomic Region: Intergenic Closest Gene: Tubgcp5 Match Type: R14L Right Nuclease TTCAGTGTTGTTCTGGT 5'-AAAAA GACAGTGTAGTACTGAT TGAAGAGTTATGTT ATGGAGATTGGCTTGAA GGTTT-3' 3'-TTTTT CTGTCACATCATGACTA ACTTCTCAATACAA TACCTCTAACCGAACTT CCAAA-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 001-106482030 Forward Primer: 5'-GTGGTGGAACACCCTCTTAGAAGT-3' Tm: 59.038 Reverse Primer: 5'-CTCTATCTGCTGGTGGAATGAAGG-3' Tm: 59.038 Expected PCR Product Length: 271 Expected CelI Cleavage Product Sizes: 138, 133 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr1:106482142-106482189
Rank: 99 Homology Score: 5 TALEN Score: 54.93 Genomic Region: Intergenic Closest Gene: Gtf2e1 Match Type: L23R Left Nuclease TTCCTGCCCAGCTCCAT 5'-TTTCC TTCAGTCTCTGCTCCAT TTCTGTTCCCGCATTTCCTTTAG ACAAGAACAATTCTGGA TCAAG-3' 3'-AAAGG AAGTCAGAGACGAGGTA AAGACAAGGGCGTAAAGGAAATC TGTTCTTGTTAAGACCT AGTTC-5' TGGTCTTGTTGTGACTT Right Nuclease Primer pair generated using optimal parameters. Primer Index: 011-065225162 Forward Primer: 5'-TGCTAGCTTCCTGTCTGCAAGCAC-3' Tm: 60.908 Reverse Primer: 5'-ATGCCCAGTGATGGAAAGATGGAG-3' Tm: 59.038 Expected PCR Product Length: 270 Expected CelI Cleavage Product Sizes: 139, 131 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr11:65225271-65225327
Rank: 100 Homology Score: 10 TALEN Score: 54.92 Genomic Region: Exon Closest Gene: Vom2r54 Match Type: R16L Right Nuclease TTCAGTGTTGTTCTGGT 5'-ATGAC CACAGTGGTGTTCAGTT TATATCAGACTTGACA AAGGAGCTGGACAAGAA TAAAA-3' 3'-TACTG GTGTCACCACAAGTCAA ATATAGTCTGAACTGT TTCCTCGACCTGTTCTT ATTTT-5' TACCTCGACCCGTCCTT Left Nuclease Primer pair generated using optimal parameters. Primer Index: 007-014531040 Forward Primer: 5'-TCTCTGTATCAGGTGGCCCC-3' Tm: 59.508 Reverse Primer: 5'-CAAGAATCTCCCCATGATGAGGTG-3' Tm: 59.038 Expected PCR Product Length: 445 Expected CelI Cleavage Product Sizes: 132, 313 In Silico PCR View in Genome Browser, Chromosomal Coordinates - chr7:14531145-14531194
Plate format Oligo Order Form
WellNameSequence5' modsInternalNotes
Primer Plate #1
A1006-138443970FGGAATCGGCACATGCAGATCTTTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A2006-138443970RTCTGGTCCTCAGAGAGTCAGTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B1020-016460972FGTCAAGGACGAAGTCATCTGGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B2020-016460972RGACAAGCTGACTGCTGCTAGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C1001-252428669FGTTGTGTTTCAGGACAGCACTACCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C2001-252428669RGTTGGAGAGGCCACATTCTTAACCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D1009-007190270FAGTTGGGCTGGTAGAAATTGCTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D2009-007190270RCTGAGTGAAACAAACGGCTCCGATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E1006-046986724FCTTCTGGCTTAGTTTCCGTCTGTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E2006-046986724RCTCAGCTTGCCCAAGGGTTATAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F1007-139879252FAAAGGCTCATTAGACACGCTCAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F2007-139879252RCACGTCTCTGCAGACCCCATTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G1005-161756246FCTCTAGGGGCTAAGTATCTCAGCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G2005-161756246RGGTGGCAAAATCTAAACCCTGTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H1009-019047855FGTGGCTTTGGTCCTCATCTGTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H2009-019047855RCCTCTTTCGGAGATAGGCATGTTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A3002-204001007FAATTTATGGGCTCTGTGCCGTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A4002-204001007RCCCAGTGCTAAGTTGAGTGTGGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B3019-057896612FCCCAGTGCTGGGGTTACAAACATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B4019-057896612RTCTTAGCCAGGAATGAGGCTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C3014-008802083FTGCCAGGCTCCTGTCTGCATTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C4014-008802083RGCTACCAGGACTCAATGGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D3008-080224511FGGGTAGCGACTCTGCAGACATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D4008-080224511RGTGACTGTGGTGAGCTGGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E3005-113632907FGGAGGAATCTCTAGAAAGTCCCAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E4005-113632907RGGCTCCTATCTGCAGGTCCATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F3003-151465311FCACACACACACACACACACACACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F4003-151465311RCACCAGTGACAACAGCACTTGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G3003-100952790FGCCATGAAGAAGACATGCAGGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G4003-100952790RGGATCACTTGAAATGTGGAGCTTCCTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H3009-065106893FCCTCTGTTGGATGTGGAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H4009-065106893RCGCACACCTATGGACATCTGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A5011-031478392FGATCTGATCCCCTTTTCTGGTGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A6011-031478392RCTTCTTTAGCACGTCGCCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B5009-004673112FAATCCACCGAGCCTAGTAACTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B6009-004673112RTACACTGCGCTCACACAGCAAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C5014-082098705FAGCCAAGGAAGAAACCTGTGCAGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C6014-082098705RCTGTGGATGGCTAGAGTGTACTCATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D5006-075907048FGGTGTCCTCATTCACCTCTGACAATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D6006-075907048RGTGTTTGGAACATCCTCTGCGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E500X-027254372FCCATTATCGCTAGCCTAGCTTACGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E600X-027254372RGACTGGGAATAAGTGGTGTGGTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F5010-013862379FCATAGGTGGGGCCTTATCAGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F6010-013862379RGGTCCCTAGTCAAGGACATTGTCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G5001-189623849FTGCATTCCCACCCCCATACTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G6001-189623849RCTGAGCACATTCAGGCATCTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H5001-140972716FGGGACCACCTCAGCTAAGGATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H6001-140972716RGTGGGGTTGTTGGTTTTCAGCTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A700X-131557987FTTTTGGATGTCAGCTATAGGGTTGGAGAAAATCTTTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
A800X-131557987RCAACAAATGATGCTAATCTAACTGGATGTCTACATGTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
B7011-011914436FGACACAGTACTCAGAGGATCCAAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B8011-011914436RGCTTGGCTTCTAGGACCAGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C7005-123636672FCTCTGAGTGACACGAATTAGTGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C8005-123636672RGGAGTGTGTCACTAAGGCTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D7004-003843423FGGTGACCAATACCAACCATCAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D8004-003843423RCCTCCTTTCAGGAAGGCTCTTTCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E700X-016509931FCTACCAATGTCTATGGAGTGACCGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E800X-016509931RGCCTAGAGTATCCCAAATGTGCACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F7005-036123844FGGCTGTAGACACTCTTCAGCTTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F8005-036123844RGTGACCTCTCTGCAGACAGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G7003-107514838FGTTGGCTTAAGGCTGCCAACTTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G8003-107514838RGTGTGTTGCCTCCTTTTCTACACGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H7004-054569528FCTGTGAGCAAGCCAACAGATAGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H8004-054569528RCCTTGGAGTTGCTACAGGCTTTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A900X-144712285FCCAAGCGAGACAGAGATCGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A1000X-144712285RGGTACTTGGCCCTCAGAATCGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B9020-043706993FGCAGAAATGGATAGTTTGTGGGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
B10020-043706993RCCGCCAAGCCCTTTTTAAGTACTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
C9004-100499585FGGCATAGCCTCTCAGGAAACAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C10004-100499585RCTTCCAGGACAGAACAGGAAAGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D9003-060396362FCCACTGGGAGTGTATTCGGTATGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D10003-060396362RGTAAACAGGCCTCTACAGAACGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E9002-159432579FGCTAAATCCCCAACCCTGCAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E10002-159432579RGTGTTTACTTGCTCAAACACCCGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F9004-135905706FGACAACGACTGCGTTCTATTTGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F10004-135905706RTCACGAGCCCTGGTTATTGTTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G9001-256112389FCCTGGATAAGTCAGTAAAGGGTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G10001-256112389RCCTTGGTGGGACCTGATACAGTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H9012-033556886FTCTGTCTGCAAGCTCCAGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H10012-033556886RAACTCTGGCCTCCTTGGTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A11006-090557385FGTCCCCACAGGCATATGATCGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A12006-090557385RGTGCTTCGGGCAGTAGAGCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B11007-067524783FTGATCAGAGCCTGCCCCTTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B12007-067524783RGACAGGGTGCTTCCTCACAATACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C110Un-021787610FCCTGGGATGTGGTGTAAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C120Un-021787610RGAGGAGCCAAATCTGGACCATTAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D11dom-003376644FCCTGGGATGTGGTGTAAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D12dom-003376644RGAGGAGCCAAATCTGGACCATTAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E110Un-038608458FCCTGGGATGTGGTGTAAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
E120Un-038608458RGAGACAACATACCCTGCTCTCACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
F110Un-051334472FCCTGGGATGTGGTGTAAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F120Un-051334472RGAGGAGCCAAATCTGGACCATTAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G110Un-061148009FCCTGGGATGTGGTGTAAGTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G120Un-061148009RGAGACAACATACCCTGCTCTCACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H11001-127719260FCCAACATTCTCCCAAGAGATTCTGGAAACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H12001-127719260RGTTCCAGGTCAACCAGGACTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
Primer Plate #2
A1008-068387105FCCGACTAGCTTCTCCCATGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A2008-068387105RTTACTGTCGGTGTCACAGTGCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B1018-068645313FCTGGGAGCCTGGAAATTTGTCTGTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
B2018-068645313RGGACACAAGCATATATTATTCTTTGGATGTGCTCTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
C1010-070982895FCAGGGTGTGTCTTTCCCAAGATACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C2010-070982895RGGGTCTCAGGAAACGTTGTGTTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D1009-052013154FGAGGCTGAGCTTGGCTTGCTTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D2009-052013154RGCAAGGTCACATAGTGTCACTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E1003-046502425FGCCAAGGCTAAAGCAGTTTGGAAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E2003-046502425RGGAGGCACATTCTTAGGCTGCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F1001-026132578FCATTCAGATACTCTGAAGCGAAACATGTTAAGGTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
F2001-026132578RCCCCTGACCAATACTTTGCAAACGTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
G1004-126653383FCCATGTGACCTTTGGACTACATGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G2004-126653383RGAGAGCCACTGACTACCATAACACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H1014-039438747FGCTCCATAAACTGGGCCTGAGATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H2014-039438747RGCTAGCCTCTACCTCTTCCTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A3001-242536006FTGGAGGTTGGGAGAGTAGAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A4001-242536006RTGAAGGAGGGAACACTCAGCAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B3005-170773963FCCAAGGTTGCTGCCAGTTCAGCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B4005-170773963RAGGAGCTGGAGAGCCAAGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C3013-002441765FCTGTCTCTGTCTCTCTTAGTTCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C4013-002441765RCCCTTTTTGCCTTTCCATGCAGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D3003-124119953FCAGTAGCTGCCTTTGACCAGGATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D4003-124119953RCAAACCAGACAATGGCTTCTGCTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E3002-175409656FCATCGGGCAGGGTTTCAAAGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E4002-175409656RGCCCAAGCTGACATTTGAGAGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F3004-174994043FGTGCGGCTCTGTCCTCACATTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F4004-174994043RGATTAAATTGCATGCAGCTGCACTAACTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G3008-060163371FTGGTCAATGTCCTTGGGGCTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G4008-060163371RCGAGTCTTTCTAGCCAGTCAAGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H3008-060289566FTGGTCAATGTCCTTGGGGCTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H4008-060289566RCGAGTCTTTCTAGCCAGTCAAGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A5012-043552977FCACCCACTTCATGTTGGAAACGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A6012-043552977RTTCCAAACCCTCTGCCCTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B5002-106965669FATAGTGGCCAGTGCCTGGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B6002-106965669RCCAGGAGAAAAGGCCATCTTCCATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C5005-063999032FCAGGAGCAAGACAAGAGTGTCTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C6005-063999032RCGGTTAGTGTGGGATGTCTTTCTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D50Un-075352159FCTTGAGAGACTGTGGTGAATGAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D60Un-075352159RGGAGGAAAAAGGGGACTGTGTTCATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E5004-092024652FCTTGAGAGACTGTGGTGAATGAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E6004-092024652RGGAGGAAAAAGGGGACTGTGTTCATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F5003-128243778FCAACCACACTGCAGACCAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F6003-128243778RGCCATGGATCTGATATTGGTGGCTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G5012-015478690FCCACTCAAGACAAGCAGAAAGGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G6012-015478690RCAAAACAGCAGCAGCAAAAGCTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H5006-079162173FACACAGAAGGCTCTCCAGAGACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H6006-079162173RACTTTGATCTCACTTCAGGTCCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A7007-112677493FTAGGGCAGAGCTGATGGACCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A8007-112677493RCGAGTCTCTTCTTGACTGTTTCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B7001-138061468FCCGTGAAGCAGGTCACAAAGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
B8001-138061468RCAGCAAGGGAAGTGCTACTTGATGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
C700X-010426535FGTTCTCTGCATCCATGCCATGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C800X-010426535RCCTCAGCATCAGTTACTGCTTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D7010-053902466FCCCATTACCACCCTCCCCTATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D8010-053902466RAGGGAGACAAATGAGGGTTTTGTCCTTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E7015-087079625FCAATCACTCCCTGCAATCCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E8015-087079625RTGACGCCTCCACTGTCCTAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F7001-172645535FCTCCTGTTTGCAAGCACATCTTGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F8001-172645535RCTGAAATGTCCAACAGTGGGGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G7017-041218534FCCAGGCCATGATTATTCTGCAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G8017-041218534RTCCCAAGTCACCTGCAAGCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H7008-044521883FCAGAGGACCTGTGAGAGACAGTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H8008-044521883RGAAGCAAATGTGAGAGGAAAAGCCTTGATGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A9005-049320556FCTGTGGTGAAGGTGTTACTGTGTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A10005-049320556RGAGAAGGCTGGACCGAATAGAAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B9012-031851371FGGGTGCCTGACTGCTATATTTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B10012-031851371RTTGCCTGCCACAACCATGCATCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C9002-139129605FCCCATGTGCAGAAGGAGTTGTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
C10002-139129605RGTTCCAGGTCAGTCAGGGATATACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
D9011-028431745FGCTCAGAACAGCTAATGTGAGTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D10011-028431745RCAATGACTGTCCAGAACTGAGGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E9001-187665749FGGAGGGAAGGAGGGAAGGAATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E10001-187665749RACACCAGTCTTGCTGAGGGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F9003-145456877FGGCGACAGTTCCTCTGTTTTTGCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F10003-145456877RCACAGTAGTGGCTGTAGGCATTTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G900X-105203723FCAGGTTCCTGTCAGCAAGTGTTTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
G1000X-105203723RGGGTTCAAATCCCCAAGGCTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters. Warning! The sequence of this region of the genome is poorly mapped.
H9004-141883124FAATCCGCAGTCTAAGCCAACAGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H10004-141883124RTGCTAGGCAAGCACTCTACCACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A11No PrimersFNo PrimersTesson_IgM_Ranking-TALENv2.0 No Primers
A12No PrimersRNo PrimersTesson_IgM_Ranking-TALENv2.0 No Primers
B11007-135956125FCACTCCTACGTAGGTATCTTGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B12007-135956125RCTCACCAGAAGAGGGCATCAAATCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C1100X-116419128FCATGGTCATGACCTTACACAATATGTTACCCTesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
C1200X-116419128RCCTCATGAGAAGTAGGCTCAAGGATesson_IgM_Ranking-TALENv2.0 Warning! Primer pair was generated using suboptimal parameters.
D1100X-146103263FCTACACTCCTTTTTGTTGGGTGGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D1200X-146103263RCTCTGCTGCAGAGCCTTTTTTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E11005-082146486FGCCAGAGGCCCTGGTCTTATTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
E12005-082146486RCTCCATTCCCTACTACAGAGAGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F11011-074482637FACAGACTTTGCAGAAGATCTAAGCCCTCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
F12011-074482637RGTCCTGGAAGTGACAGGTGTACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G1100X-040773744FGGGTGAAACAGCATGTGGCATCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
G1200X-040773744RGGTCCTATTAACTCCTACCTCCAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H11003-048025715FACTGTCACACTGCTGTCACGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
H12003-048025715RGACTGTCTTCGCAATAGGGTTATCTCATCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
Primer Plate #3
A1008-087710971FGTGGCTTATGGGTCGATGACCACATesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
A2008-087710971RCTGCAGACTGCAAGGTTGTTCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B1001-106482030FGTGGTGGAACACCCTCTTAGAAGTTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
B2001-106482030RCTCTATCTGCTGGTGGAATGAAGGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C1011-065225162FTGCTAGCTTCCTGTCTGCAAGCACTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
C2011-065225162RATGCCCAGTGATGGAAAGATGGAGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D1007-014531040FTCTCTGTATCAGGTGGCCCCTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.
D2007-014531040RCAAGAATCTCCCCATGATGAGGTGTesson_IgM_Ranking-TALENv2.0 Primer pair generated using optimal parameters.